TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.
Identifieur interne : 000351 ( Main/Exploration ); précédent : 000350; suivant : 000352TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.
Auteurs : Meiyan Liu [États-Unis, République populaire de Chine] ; Lei Lei [États-Unis] ; Carol Powers [États-Unis] ; Zhiyong Liu [République populaire de Chine] ; Kimberly G. Campbell [États-Unis] ; Xianming Chen [États-Unis] ; Robert L. Bowden [États-Unis] ; Brett F. Carver [États-Unis] ; Liuling Yan [États-Unis]Source :
- TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [ 1432-2242 ] ; 2016.
Descripteurs français
- KwdFr :
- Animaux (MeSH), Bactéries (MeSH), Basidiomycota (MeSH), Chromosomes de plante (MeSH), Diptera (MeSH), Données de séquences moléculaires (MeSH), Gènes de plante (MeSH), Locus de caractère quantitatif (MeSH), Maladies des plantes (génétique), Marche sur chromosome (MeSH), Marqueurs génétiques (MeSH), Oryza (génétique), Polymorphisme de nucléotide simple (MeSH), Produits agricoles (génétique), Résistance à la maladie (génétique), Similitude de séquences d'acides aminés (MeSH), Séquence d'acides aminés (MeSH), Triticum (génétique), Variation génétique (MeSH).
- MESH :
- génétique : Maladies des plantes, Oryza, Produits agricoles, Résistance à la maladie, Triticum.
- Animaux, Bactéries, Basidiomycota, Chromosomes de plante, Diptera, Données de séquences moléculaires, Gènes de plante, Locus de caractère quantitatif, Marche sur chromosome, Marqueurs génétiques, Polymorphisme de nucléotide simple, Similitude de séquences d'acides aminés, Séquence d'acides aminés, Variation génétique.
English descriptors
- KwdEn :
- Amino Acid Sequence (MeSH), Animals (MeSH), Bacteria (MeSH), Basidiomycota (MeSH), Chromosome Walking (MeSH), Chromosomes, Plant (MeSH), Crops, Agricultural (genetics), Diptera (MeSH), Disease Resistance (genetics), Genes, Plant (MeSH), Genetic Markers (MeSH), Genetic Variation (MeSH), Molecular Sequence Data (MeSH), Oryza (genetics), Plant Diseases (genetics), Polymorphism, Single Nucleotide (MeSH), Quantitative Trait Loci (MeSH), Sequence Homology, Amino Acid (MeSH), Triticum (genetics).
- MESH :
- chemical : Genetic Markers.
- genetics : Crops, Agricultural, Disease Resistance, Oryza, Plant Diseases, Triticum.
- Amino Acid Sequence, Animals, Bacteria, Basidiomycota, Chromosome Walking, Chromosomes, Plant, Diptera, Genes, Plant, Genetic Variation, Molecular Sequence Data, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Sequence Homology, Amino Acid.
Abstract
KEY MESSAGE
The wheat ortholog of the rice gene OsXA21 against bacterial leaf blight showed resistance to multiple pests in bread wheat but different interacting proteins.
ABSTRACT
A quantitative trait locus QYr.osu-5A on the long arm of chromosome 5A in bread wheat (Triticum aestivum L., 2n = 6x = 42; AABBDD) was previously reported to confer consistent resistance in adult plants to predominant stripe rust races, but the gene causing the quantitative trait locus (QTL) is not known. Single-nucleotide polymorphism (SNP) markers were used to saturate the QTL region. Comparative and syntenic regions between wheat and rice (Oryza sativa) were applied to identify candidate genes for QYr.osu-5A. TaXA21-A1, which is referred to as a wheat ortholog of OsXA21-like gene on chromosome 9 in rice, was mapped under the peak of the QYr.osu-5A. TaXA21-A1 not only explained the phenotypic variation in reaction to different stripe rust races but also showed significant effects on resistance to powdery mildew and Hessian fly biotype BP. The natural allelic variation resulted in the alternations of four amino acids in deduced TaXA21-A1 proteins. The interacting proteins of TaXA21-A1 were different from those identified by OsXA21 on rice chromosome 11 against bacterial leaf blight. TaXA21-A1 confers unique resistance against multiple pests in wheat but might not have common protein interactors or thus overlapping functions with OsXA21 in rice. XA21 function has diverged during evolution of cereal crops. The molecular marker developed for TaXA21-A1 would accelerate its application of the candidate gene at the QYr.osu-5A locus in wheat breeding programs.
DOI: 10.1007/s00122-015-2631-9
PubMed: 26602233
Affiliations:
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Campbell</name><affiliation wicri:level="1"><nlm:affiliation>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164</wicri:regionArea><wicri:noRegion>99164</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164</wicri:regionArea><wicri:noRegion>99164</wicri:noRegion></affiliation></author><author><name sortKey="Chen, Xianming" sort="Chen, Xianming" uniqKey="Chen X" first="Xianming" last="Chen">Xianming Chen</name><affiliation wicri:level="1"><nlm:affiliation>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164</wicri:regionArea><wicri:noRegion>99164</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Plant Pathology, Washington State University, Pullman, WA, 99164, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology, Washington State University, Pullman, WA, 99164</wicri:regionArea><wicri:noRegion>99164</wicri:noRegion></affiliation></author><author><name sortKey="Bowden, Robert L" sort="Bowden, Robert L" uniqKey="Bowden R" first="Robert L" last="Bowden">Robert L. Bowden</name><affiliation wicri:level="1"><nlm:affiliation>Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506</wicri:regionArea><wicri:noRegion>66506</wicri:noRegion></affiliation></author><author><name sortKey="Carver, Brett F" sort="Carver, Brett F" uniqKey="Carver B" first="Brett F" last="Carver">Brett F. Carver</name><affiliation wicri:level="1"><nlm:affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074</wicri:regionArea><wicri:noRegion>74074</wicri:noRegion></affiliation></author><author><name sortKey="Yan, Liuling" sort="Yan, Liuling" uniqKey="Yan L" first="Liuling" last="Yan">Liuling Yan</name><affiliation wicri:level="1"><nlm:affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA. liuling.yan@okstate.edu.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074</wicri:regionArea><wicri:noRegion>74074</wicri:noRegion></affiliation></author></analytic><series><title level="j">TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</title><idno type="eISSN">1432-2242</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence (MeSH)</term><term>Animals (MeSH)</term><term>Bacteria (MeSH)</term><term>Basidiomycota (MeSH)</term><term>Chromosome Walking (MeSH)</term><term>Chromosomes, Plant (MeSH)</term><term>Crops, Agricultural (genetics)</term><term>Diptera (MeSH)</term><term>Disease Resistance (genetics)</term><term>Genes, Plant (MeSH)</term><term>Genetic Markers (MeSH)</term><term>Genetic Variation (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Oryza (genetics)</term><term>Plant Diseases (genetics)</term><term>Polymorphism, Single Nucleotide (MeSH)</term><term>Quantitative Trait Loci (MeSH)</term><term>Sequence Homology, Amino Acid (MeSH)</term><term>Triticum (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term><term>Bactéries (MeSH)</term><term>Basidiomycota (MeSH)</term><term>Chromosomes de plante (MeSH)</term><term>Diptera (MeSH)</term><term>Données de séquences moléculaires (MeSH)</term><term>Gènes de plante (MeSH)</term><term>Locus de caractère quantitatif (MeSH)</term><term>Maladies des plantes (génétique)</term><term>Marche sur chromosome (MeSH)</term><term>Marqueurs génétiques (MeSH)</term><term>Oryza (génétique)</term><term>Polymorphisme de nucléotide simple (MeSH)</term><term>Produits agricoles (génétique)</term><term>Résistance à la maladie (génétique)</term><term>Similitude de séquences d'acides aminés (MeSH)</term><term>Séquence d'acides aminés (MeSH)</term><term>Triticum (génétique)</term><term>Variation génétique (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Genetic Markers</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Crops, Agricultural</term><term>Disease Resistance</term><term>Oryza</term><term>Plant Diseases</term><term>Triticum</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Maladies des plantes</term><term>Oryza</term><term>Produits agricoles</term><term>Résistance à la maladie</term><term>Triticum</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Animals</term><term>Bacteria</term><term>Basidiomycota</term><term>Chromosome Walking</term><term>Chromosomes, Plant</term><term>Diptera</term><term>Genes, Plant</term><term>Genetic Variation</term><term>Molecular Sequence Data</term><term>Polymorphism, Single Nucleotide</term><term>Quantitative Trait Loci</term><term>Sequence Homology, Amino Acid</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Bactéries</term><term>Basidiomycota</term><term>Chromosomes de plante</term><term>Diptera</term><term>Données de séquences moléculaires</term><term>Gènes de plante</term><term>Locus de caractère quantitatif</term><term>Marche sur chromosome</term><term>Marqueurs génétiques</term><term>Polymorphisme de nucléotide simple</term><term>Similitude de séquences d'acides aminés</term><term>Séquence d'acides aminés</term><term>Variation génétique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>KEY MESSAGE</b></p><p>The wheat ortholog of the rice gene OsXA21 against bacterial leaf blight showed resistance to multiple pests in bread wheat but different interacting proteins.</p></div><div type="abstract" xml:lang="en"><p><b>ABSTRACT</b></p><p>A quantitative trait locus QYr.osu-5A on the long arm of chromosome 5A in bread wheat (Triticum aestivum L., 2n = 6x = 42; AABBDD) was previously reported to confer consistent resistance in adult plants to predominant stripe rust races, but the gene causing the quantitative trait locus (QTL) is not known. Single-nucleotide polymorphism (SNP) markers were used to saturate the QTL region. Comparative and syntenic regions between wheat and rice (Oryza sativa) were applied to identify candidate genes for QYr.osu-5A. TaXA21-A1, which is referred to as a wheat ortholog of OsXA21-like gene on chromosome 9 in rice, was mapped under the peak of the QYr.osu-5A. TaXA21-A1 not only explained the phenotypic variation in reaction to different stripe rust races but also showed significant effects on resistance to powdery mildew and Hessian fly biotype BP. The natural allelic variation resulted in the alternations of four amino acids in deduced TaXA21-A1 proteins. The interacting proteins of TaXA21-A1 were different from those identified by OsXA21 on rice chromosome 11 against bacterial leaf blight. TaXA21-A1 confers unique resistance against multiple pests in wheat but might not have common protein interactors or thus overlapping functions with OsXA21 in rice. XA21 function has diverged during evolution of cereal crops. The molecular marker developed for TaXA21-A1 would accelerate its application of the candidate gene at the QYr.osu-5A locus in wheat breeding programs.</p></div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26602233</PMID><DateCompleted><Year>2016</Year><Month>06</Month><Day>06</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-2242</ISSN><JournalIssue CitedMedium="Internet"><Volume>129</Volume><Issue>2</Issue><PubDate><Year>2016</Year><Month>Feb</Month></PubDate></JournalIssue><Title>TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</Title><ISOAbbreviation>Theor Appl Genet</ISOAbbreviation></Journal><ArticleTitle>TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.</ArticleTitle><Pagination><MedlinePgn>345-55</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00122-015-2631-9</ELocationID><Abstract><AbstractText Label="KEY MESSAGE" NlmCategory="CONCLUSIONS">The wheat ortholog of the rice gene OsXA21 against bacterial leaf blight showed resistance to multiple pests in bread wheat but different interacting proteins.</AbstractText><AbstractText Label="ABSTRACT" NlmCategory="UNASSIGNED">A quantitative trait locus QYr.osu-5A on the long arm of chromosome 5A in bread wheat (Triticum aestivum L., 2n = 6x = 42; AABBDD) was previously reported to confer consistent resistance in adult plants to predominant stripe rust races, but the gene causing the quantitative trait locus (QTL) is not known. Single-nucleotide polymorphism (SNP) markers were used to saturate the QTL region. Comparative and syntenic regions between wheat and rice (Oryza sativa) were applied to identify candidate genes for QYr.osu-5A. TaXA21-A1, which is referred to as a wheat ortholog of OsXA21-like gene on chromosome 9 in rice, was mapped under the peak of the QYr.osu-5A. TaXA21-A1 not only explained the phenotypic variation in reaction to different stripe rust races but also showed significant effects on resistance to powdery mildew and Hessian fly biotype BP. The natural allelic variation resulted in the alternations of four amino acids in deduced TaXA21-A1 proteins. The interacting proteins of TaXA21-A1 were different from those identified by OsXA21 on rice chromosome 11 against bacterial leaf blight. TaXA21-A1 confers unique resistance against multiple pests in wheat but might not have common protein interactors or thus overlapping functions with OsXA21 in rice. XA21 function has diverged during evolution of cereal crops. The molecular marker developed for TaXA21-A1 would accelerate its application of the candidate gene at the QYr.osu-5A locus in wheat breeding programs.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Meiyan</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>School of Life Science, Jiangsu Normal University, Xuzhou, Jiangsu, 221116, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lei</LastName><ForeName>Lei</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Powers</LastName><ForeName>Carol</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>Zhiyong</ForeName><Initials>Z</Initials><AffiliationInfo><Affiliation>Department of Plant Genetics and Breeding, China Agricultural University, Beijing, 100193, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Campbell</LastName><ForeName>Kimberly G</ForeName><Initials>KG</Initials><AffiliationInfo><Affiliation>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Xianming</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Wheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Plant Pathology, Washington State University, Pullman, WA, 99164, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bowden</LastName><ForeName>Robert L</ForeName><Initials>RL</Initials><AffiliationInfo><Affiliation>Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Carver</LastName><ForeName>Brett F</ForeName><Initials>BF</Initials><AffiliationInfo><Affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yan</LastName><ForeName>Liuling</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA. liuling.yan@okstate.edu.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>11</Month><Day>25</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Theor Appl Genet</MedlineTA><NlmUniqueID>0145600</NlmUniqueID><ISSNLinking>0040-5752</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005819">Genetic Markers</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName 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name="États-Unis"><noRegion><name sortKey="Liu, Meiyan" sort="Liu, Meiyan" uniqKey="Liu M" first="Meiyan" last="Liu">Meiyan Liu</name></noRegion><name sortKey="Bowden, Robert L" sort="Bowden, Robert L" uniqKey="Bowden R" first="Robert L" last="Bowden">Robert L. 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Carver</name><name sortKey="Chen, Xianming" sort="Chen, Xianming" uniqKey="Chen X" first="Xianming" last="Chen">Xianming Chen</name><name sortKey="Chen, Xianming" sort="Chen, Xianming" uniqKey="Chen X" first="Xianming" last="Chen">Xianming Chen</name><name sortKey="Lei, Lei" sort="Lei, Lei" uniqKey="Lei L" first="Lei" last="Lei">Lei Lei</name><name sortKey="Powers, Carol" sort="Powers, Carol" uniqKey="Powers C" first="Carol" last="Powers">Carol Powers</name><name sortKey="Yan, Liuling" sort="Yan, Liuling" uniqKey="Yan L" first="Liuling" last="Yan">Liuling Yan</name></country><country name="République populaire de Chine"><noRegion><name sortKey="Liu, Meiyan" sort="Liu, Meiyan" uniqKey="Liu M" first="Meiyan" last="Liu">Meiyan Liu</name></noRegion><name sortKey="Liu, Zhiyong" sort="Liu, Zhiyong" uniqKey="Liu Z" first="Zhiyong" last="Liu">Zhiyong Liu</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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